STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB91599.1NlpC/P60 family protein; KEGG: bpu:BPUM_3255 2.6e-23 ywtD; C40 family peptidase. (333 aa)    
Predicted Functional Partners:
KXB91597.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.978
KXB91598.1
Hypothetical protein; KEGG: smp:SMAC_06805 1.6e-06 hypothetical protein; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.954
KXB91600.1
Hypothetical protein.
 
   0.953
KXB90538.1
KEGG: cya:CYA_1627 4.9e-33 M23B family peptidase.
 
  
 0.909
KXB91029.1
Hypothetical protein.
 
   0.804
KXB92688.1
KEGG: cya:CYA_1627 2.7e-55 M23B family peptidase; Psort location: OuterMembrane, score: 8.28.
 
      0.652
KXB91033.1
KEGG: efc:EFAU004_02773 3.8e-17 DNA-directed RNA polymerase specialized sigma subunit; Psort location: Cytoplasmic, score: 8.96.
  
    0.640
KXB91596.1
Hypothetical protein.
       0.547
KXB91031.1
DNA-binding helix-turn-helix protein; KEGG: mla:Mlab_1603 1.8e-05 adenine deaminase K01486.
  
     0.507
KXB91034.1
Hypothetical protein; KEGG: smb:smi_1339 1.6e-27 pnpA; polyribonucleotide nucleotidyltransferase.
  
     0.504
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.