STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB90616.1Putative permease; Psort location: CytoplasmicMembrane, score: 10.00. (525 aa)    
Predicted Functional Partners:
KXB90617.1
TIGR03943 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.969
KXB90615.1
CobW/P47K family protein; KEGG: reh:H16_A3373 1.0e-19 h16_A3373; G3E family GTPase; Psort location: Cytoplasmic, score: 9.97.
 
    0.893
tatA
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
       0.779
KXB92377.1
ABC transporter, substrate-binding protein; KEGG: saj:SaurJH9_2430 1.5e-30 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.721
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
    
   0.626
rpsN
Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
 
 0.621
KXB90852.1
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; KEGG: med:MELS_1570 2.0e-91 precorrin-6Y C5; K00595 precorrin-6Y C5,15-methyltransferase / precorrin-8W decarboxylase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.486
KXB90415.1
Putative selenium-dependent hydroxylase accessory protein YqeC; Psort location: Cytoplasmic, score: 8.96.
  
     0.486
KXB92381.1
Transcriptional repressor SmtB family protein; KEGG: rru:Rru_A1450 5.8e-08 ArsR family transcriptional regulator K03741; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.466
KXB91040.1
Putative transcriptional repressor SmtB; KEGG: pfe:PSF113_5488 2.3e-07 transcriptional regulator, ArsR family / Methyltransferase fusion; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.466
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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