STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB90659.1KEGG: efi:OG1RF_10529 1.4e-49 radical SAM protein K07139; Psort location: Cytoplasmic, score: 8.96. (320 aa)    
Predicted Functional Partners:
KXB90660.1
Putative PhoH-like protein; KEGG: apb:SAR116_1589 1.6e-66 PhoH family protein K06217; Psort location: Cytoplasmic, score: 9.97.
       0.794
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.764
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.606
KXB90663.1
CBS domain protein; KEGG: hpa:HPAG1_1423 3.3e-59 hemolysin domain-containing protein K00088; Psort location: CytoplasmicMembrane, score: 10.00.
       0.557
KXB93108.1
Putative rRNA methylase; KEGG: mps:MPTP_1666 2.0e-29 MraW methylase family SAM-dependent methyltransferase.
 
     0.556
KXB90664.1
Putative DNA repair protein RecO.
       0.539
KXB90658.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.538
KXB90657.1
NAD+ synthase; KEGG: med:MELS_2113 1.4e-216 NAD+ synthetase; K01950 NAD+ synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 9.97.
       0.511
KXB90721.1
SIS domain protein; KEGG: bte:BTH_I1550 1.6e-36 bifunctional glucokinase/RpiR family transcriptional regulator; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.97.
 
      0.437
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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