STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB90692.1Radical SAM domain protein; KEGG: hya:HY04AAS1_1239 1.5e-17 hydrolase, TatD family; K03424 TatD DNase family protein. (170 aa)    
Predicted Functional Partners:
KXB92368.1
Hydrolase, TatD family; KEGG: med:MELS_0386 1.4e-90 hydrolase; K03424 TatD DNase family protein; Psort location: Cytoplasmic, score: 9.97.
 
      0.899
KXB90693.1
KEGG: med:MELS_2060 1.3e-62 pyridoxal kinase; K00868 pyridoxine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.660
KXB91668.1
KEGG: med:MELS_2044 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
     
 0.642
KXB92965.1
KEGG: thx:Thet_0431 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
     
 0.602
KXB90771.1
KEGG: afn:Acfer_0789 0. formate acetyltransferase K00656; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.512
KXB90170.1
KEGG: cbe:Cbei_4061 3.4e-295 pyruvate formate-lyase; K00656 formate C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.512
KXB90689.1
MazG family protein; KEGG: bmq:BMQ_0078 1.5e-61 Tetrapyrrole (Corrin/Porphyrin) methylase, MazG protein K02499; Psort location: Cytoplasmic, score: 8.96.
       0.482
KXB90690.1
Putative stage V sporulation protein B; KEGG: ssr:SALIVB_0347 4.6e-26 cystathionine gamma-synthase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.482
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.482
KXB90694.1
Hypothetical protein; KEGG: jde:Jden_1915 0.00097 NADH dehydrogenase (quinone) K05568; Psort location: CytoplasmicMembrane, score: 10.00.
       0.467
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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