STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB90718.12Fe-2S iron-sulfur cluster binding domain protein; KEGG: apb:SAR116_1080 1.7e-41 electron transfer protein. (712 aa)    
Predicted Functional Partners:
KXB90717.1
KEGG: med:MELS_1849 0. homocysteine S-methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.903
KXB90716.1
Transcriptional regulator CtsR family protein; Psort location: Cytoplasmic, score: 8.96.
       0.498
KXB90714.1
ATP:guanido phosphotransferase, catalytic domain protein; KEGG: med:MELS_1353 6.0e-44 ATP:guanido phosphotransferase; K00936; Psort location: Cytoplasmic, score: 8.96.
       0.483
KXB90715.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.483
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
       0.480
htpX
Peptidase, M48 family; KEGG: med:MELS_1832 4.3e-112 protease HtpX homolog; K03799 heat shock protein HtpX; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase M48B family.
       0.452
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.