STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB90744.13D domain protein; Psort location: Cytoplasmic, score: 8.96. (325 aa)    
Predicted Functional Partners:
KXB90724.1
Hypothetical protein.
   
  
 0.785
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
  
 0.616
KXB91480.1
KEGG: nme:NMB0066 2.3e-122 ermC; rRNA adenine N-6-methyltransferase K00561; Psort location: Cytoplasmic, score: 9.97; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.558
KXB90825.1
NlpC/P60 family protein; KEGG: bmq:BMQ_3809 5.2e-29 cell wall hydrolase.
 
  
 0.496
ispE
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
     
 0.491
rnmV
Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.
     
 0.478
KXB91887.1
Hypothetical protein; KEGG: ova:OBV_35240 2.1e-07 putative glycoside hydrolase; Psort location: CytoplasmicMembrane, score: 9.82.
  
   
 0.468
rpsB
Ribosomal protein S2; KEGG: apb:SAR116_0519 1.8e-60 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family.
       0.465
KXB92368.1
Hydrolase, TatD family; KEGG: med:MELS_0386 1.4e-90 hydrolase; K03424 TatD DNase family protein; Psort location: Cytoplasmic, score: 9.97.
     
 0.454
KXB90538.1
KEGG: cya:CYA_1627 4.9e-33 M23B family peptidase.
 
  
 0.445
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.