STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB90752.1comEA protein; KEGG: hor:Hore_06940 6.0e-10 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 9.82. (178 aa)    
Predicted Functional Partners:
KXB90751.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 8.7e-09 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.884
KXB90750.1
KEGG: med:MELS_1440 4.3e-57 DNA polymerase III; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
       0.800
KXB90108.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 1.4e-19 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.787
KXB90110.1
KEGG: pen:PSEEN2333 2.9e-74 XcpR-2; type II secretion pathway protein E K02454; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.761
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.669
KXB90106.1
Hypothetical protein; KEGG: med:MELS_1552 4.5e-23 peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.613
KXB90107.1
Putative general secretion pathway protein G.
   
  
 0.564
KXB90548.1
KEGG: shn:Shewana3_3590 1.0e-16 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.26.
   
  
 0.519
KXB92297.1
Acyltransferase; KEGG: med:MELS_0945 2.5e-54 acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: Cytoplasmic, score: 8.96.
    
  0.508
KXB90748.1
TrpR family protein YerC/YecD.
       0.491
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.