STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB90478.1Hydrogenase maturation GTPase HydF; KEGG: sul:SYO3AOP1_0977 1.8e-18 trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase; Psort location: Cytoplasmic, score: 9.12. (400 aa)    
Predicted Functional Partners:
KXB92601.1
Iron-only hydrogenase maturation rSAM protein HydE; KEGG: med:MELS_0220 5.3e-155 radical SAM domain protein; K01012 biotin synthetase; Psort location: Cytoplasmic, score: 8.96.
   
 0.929
KXB90489.1
Putative iron-only hydrogenase system regulator.
 
   
 0.893
KXB90480.1
Hypothetical protein; KEGG: clj:CLJU_c23110 1.5e-26 nitrogenase iron-molybdenum cofactor biosynthesis protein K02587; Psort location: Cytoplasmic, score: 8.96.
 
     0.845
KXB90479.1
KEGG: sgy:Sgly_2786 1.9e-09 oxidoreductase/nitrogenase component 1; K02591 nitrogenase molybdenum-iron protein beta chain.
 
     0.840
KXB92345.1
KEGG: hor:Hore_19320 2.8e-46 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 8.96.
   
 0.813
KXB92767.1
Hydrogenase, Fe-only; KEGG: vpr:Vpar_1830 6.3e-127 hydrogenase, Fe-only; K00336 NADH-quinone oxidoreductase subunit G.
 
   
 0.777
KXB90481.1
KEGG: clj:CLJU_c23050 5.5e-89 nifH2; nitrogenase iron protein K02588; Psort location: Cytoplasmic, score: 8.96; Belongs to the NifH/BchL/ChlL family.
       0.777
KXB90482.1
KEGG: npu:Npun_R0359 3.1e-79 hydrogenase expression/formation protein HypE K04655; Psort location: Cytoplasmic, score: 8.96.
     
 0.702
KXB90483.1
Hydrogenase expression/formation protein HypD; Psort location: Cytoplasmic, score: 8.96.
     
 0.702
KXB90484.1
Hydrogenase assembly chaperone HypC/HupF; KEGG: slt:Slit_1622 0.00023 hydrogenase maturation protease; K03605 hydrogenase 1 maturation protease.
  
    0.697
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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