STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB90411.1L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: med:MELS_0291 1.1e-88 L-serine dehydratase; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the iron-sulfur dependent L-serine dehydratase family. (219 aa)    
Predicted Functional Partners:
KXB90412.1
L-serine dehydratase, iron-sulfur-dependent, alpha subunit; KEGG: med:MELS_0290 3.7e-99 L-serine dehydratase; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 9.26; Belongs to the iron-sulfur dependent L-serine dehydratase family.
 
 0.999
KXB91426.1
KEGG: med:MELS_1276 4.4e-167 threonine ammonia-lyase; K01754 threonine dehydratase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.893
KXB90390.1
KEGG: med:MELS_0644 7.1e-80 serine O-acetyltransferase; K00640 serine O-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
     
 0.873
KXB92309.1
KEGG: med:MELS_0958 5.8e-165 homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.866
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
     
 0.856
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
   
 
 0.821
KXB90409.1
Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.
       0.762
addA
ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.
       0.762
KXB93120.1
Putative alpha-ribazole phosphatase; KEGG: med:MELS_1001 4.0e-70 phosphoglycerate mutase family protein; K15634 probable phosphoglycerate mutase; Psort location: Cytoplasmic, score: 9.97.
    
  0.720
KXB90210.1
KEGG: med:MELS_0905 1.7e-71 phosphoglycerate mutase family protein; K15634 probable phosphoglycerate mutase; Psort location: Cytoplasmic, score: 9.97.
    
  0.720
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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