STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB90220.1Hydrolase, carbon-nitrogen family; KEGG: bsu:BSU13570 3.2e-52 mtnU; hydrolase K08590; Psort location: Cytoplasmic, score: 9.97. (254 aa)    
Predicted Functional Partners:
KXB92965.1
KEGG: thx:Thet_0431 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.904
KXB91668.1
KEGG: med:MELS_2044 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
 
  0.892
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
 
 0.831
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
  
 0.692
KXB90546.1
KEGG: med:MELS_0569 0. phosphoribosylformylglycinamidine synthase; K01952 phosphoribosylformylglycinamidine synthase; Psort location: CytoplasmicMembrane, score: 8.46.
  
 
 0.669
KXB93156.1
KEGG: cst:CLOST_0172 1.6e-146 NADH oxidase (noxase); Psort location: Cytoplasmic, score: 9.97.
   
 
  0.618
KXB93027.1
KEGG: med:MELS_0704 1.6e-153 pyridine nucleotide-disulfide oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
 
 0.579
KXB90219.1
Glutamate dehydrogenase, NAD-specific; KEGG: med:MELS_0760 1.4e-218 glu/Leu/Phe/Val dehydrogenase; K00262 glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.577
hldE
Putative protein RfaE, domain I; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
 
 
  0.561
KXB90221.1
YbaK/EbsC protein; KEGG: bya:BANAU_2580 1.0e-30 yjdI; prolyl-tRNA synthetase K03976; Psort location: Cytoplasmic, score: 9.26; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.543
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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