STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO15867.1Hypothetical protein; KEGG: efc:EFAU004_00298 1.0e-11 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 7.50. (125 aa)    
Predicted Functional Partners:
KXO15747.1
Hypothetical protein; KEGG: snc:HMPREF0837_11442 4.5e-06 nic; nickase; Psort location: Cytoplasmic, score: 7.50.
     0.988
KXO14599.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.976
KXO15157.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.966
KXO15866.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     0.813
KXO15625.1
Hypothetical protein.
 
     0.805
KXO16905.1
UvrD/REP helicase; ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
  
 
 0.645
KXO16601.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.621
KXO16769.1
KEGG: bpu:BPUM_0625 1.4e-179 pcrA; ATP-dependent DNA helicase K03657; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.531
KXO15040.1
UvrD/REP helicase; KEGG: fma:FMG_0647 1.0e-103 DNA helicase II; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.531
KXO15574.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     0.500
Your Current Organism:
Clostridiales bacterium KA00134
NCBI taxonomy Id: 1588750
Other names: C. bacterium KA00134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.