STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54467.1Elongation factor G. (194 aa)    
Predicted Functional Partners:
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
 
 
    0.922
KXB53892.1
Methyltransferase domain protein; KEGG: mru:mru_0897 5.0e-31 SAM-dependent methyltransferase UbiE family; Psort location: Cytoplasmic, score: 7.50.
 
      0.900
KXB52576.1
KEGG: hac:Hac_1074 5.2e-116 typA; GTP-binding protein TYPA/BIPA-like protein K06207; Psort location: CytoplasmicMembrane, score: 8.78.
 
      0.900
gyrA
DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
  
 0.796
KXB54060.1
Putative DNA gyrase, B subunit; KEGG: eyy:EGYY_00050 1.8e-223 hypothetical protein; K02470 DNA gyrase subunit B; Psort location: Cytoplasmic, score: 9.97.
 
    0.749
KXB52580.1
DNA gyrase, B subunit protein; KEGG: eyy:EGYY_00050 1.7e-53 hypothetical protein; K02470 DNA gyrase subunit B; Psort location: Cytoplasmic, score: 9.97.
 
    0.730
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
 
 
    0.674
KXB54468.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.664
KXB54107.1
Hypothetical protein; KEGG: ele:Elen_1312 2.9e-138 THUMP domain-containing protein; K12297 23S rRNA (guanine2445-N2)-methyltransferase; Psort location: CytoplasmicMembrane, score: 9.55.
  
   0.625
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.608
Your Current Organism:
Coriobacteriales bacterium DNF00809
NCBI taxonomy Id: 1588753
Other names: C. bacterium DNF00809
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