STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53765.1Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 1.0e-25 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 7.50; Belongs to the 'phage' integrase family. (358 aa)    
Predicted Functional Partners:
KXB48217.1
KEGG: ccu:Ccur_09770 0. pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
    
  0.910
KXB51783.1
Repeat protein; Psort location: Cellwall, score: 9.39.
  
     0.625
KXB53763.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.603
KXB53764.1
Hypothetical protein.
       0.603
KXB48214.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: mab:MAB_0309 1.6e-09 DNA polymerase III subunit gamma/tau; K02343 DNA polymerase III subunit gamma/tau.
  
    0.597
topA
DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]
 
  
 0.529
KXB53762.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.518
KXB48974.1
KEGG: eyy:EGYY_25950 0. RecJ; single-stranded DNA-specific exonuclease; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 9.89.
  
  
 0.405
Your Current Organism:
Coriobacteriales bacterium DNF00809
NCBI taxonomy Id: 1588753
Other names: C. bacterium DNF00809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.