STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53625.1Putative response regulator protein GraR; Psort location: Cytoplasmic, score: 9.97. (224 aa)    
Predicted Functional Partners:
KXB53626.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Psort location: CytoplasmicMembrane, score: 8.78.
  0.980
KXB53856.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ova:OBV_00440 3.1e-45 putative two-component histidine kinase; Psort location: CytoplasmicMembrane, score: 9.96.
 
  0.910
KXB52378.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 2.5e-45 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.96.
  0.902
KXB48878.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: eyy:EGYY_02400 9.2e-71 BaeS; signal transduction histidine kinase; K14982 two-component system, OmpR family, sensor histidine kinase CiaH; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.901
KXB49105.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: apv:Apar_1348 1.5e-93 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.96.
  0.897
KXB48064.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcz:BCZK0561 4.5e-39 lcoS; sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
  0.895
KXB53226.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Psort location: CytoplasmicMembrane, score: 9.51.
  0.861
KXB53628.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.763
KXB53861.1
Transcriptional regulatory protein; KEGG: eci:UTI89_C0420 4.9e-17 phoB; transcriptional regulator PhoB K07657; Psort location: Cytoplasmic, score: 9.97.
  
     0.761
KXB53627.1
ABC transporter, ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
     0.700
Your Current Organism:
Coriobacteriales bacterium DNF00809
NCBI taxonomy Id: 1588753
Other names: C. bacterium DNF00809
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