node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXB47838.1 | KXB53642.1 | HMPREF3190_01736 | HMPREF3190_00472 | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | 0.949 |
KXB47838.1 | KXB53643.1 | HMPREF3190_01736 | HMPREF3190_00473 | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | Hypothetical protein; Psort location: Cytoplasmic, score: 9.67. | 0.949 |
KXB47838.1 | KXB54077.1 | HMPREF3190_01736 | HMPREF3190_00166 | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | Bacterial RNA polymerase, alpha chain domain protein; KEGG: ele:Elen_0715 3.0e-230 DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta'; Psort location: Cytoplasmic, score: 9.97. | 0.991 |
KXB47838.1 | KXB54151.1 | HMPREF3190_01736 | HMPREF3190_00165 | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.991 |
KXB47838.1 | rplA | HMPREF3190_01736 | HMPREF3190_01355 | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.776 |
KXB47838.1 | rplB | HMPREF3190_01736 | HMPREF3190_00646 | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.820 |
KXB47838.1 | rpsD | HMPREF3190_01736 | HMPREF3190_01639 | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.978 |
KXB47838.1 | rpsG | HMPREF3190_01736 | HMPREF3190_00654 | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.743 |
KXB47838.1 | rpsL | HMPREF3190_01736 | HMPREF3190_00655 | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.746 |
KXB53642.1 | KXB47838.1 | HMPREF3190_00472 | HMPREF3190_01736 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | 0.949 |
KXB53642.1 | KXB53643.1 | HMPREF3190_00472 | HMPREF3190_00473 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | Hypothetical protein; Psort location: Cytoplasmic, score: 9.67. | 0.991 |
KXB53642.1 | KXB54077.1 | HMPREF3190_00472 | HMPREF3190_00166 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | Bacterial RNA polymerase, alpha chain domain protein; KEGG: ele:Elen_0715 3.0e-230 DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta'; Psort location: Cytoplasmic, score: 9.97. | 0.952 |
KXB53642.1 | KXB54151.1 | HMPREF3190_00472 | HMPREF3190_00165 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.952 |
KXB53642.1 | rplA | HMPREF3190_00472 | HMPREF3190_01355 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.927 |
KXB53642.1 | rplB | HMPREF3190_00472 | HMPREF3190_00646 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.940 |
KXB53642.1 | rplE | HMPREF3190_00472 | HMPREF3190_00637 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.927 |
KXB53642.1 | rpsD | HMPREF3190_00472 | HMPREF3190_01639 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.927 |
KXB53642.1 | rpsG | HMPREF3190_00472 | HMPREF3190_00654 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.946 |
KXB53642.1 | rpsL | HMPREF3190_00472 | HMPREF3190_00655 | Elongation factor Tu GTP binding domain protein; Psort location: Cytoplasmic, score: 9.67. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.946 |
KXB53643.1 | KXB47838.1 | HMPREF3190_00473 | HMPREF3190_01736 | Hypothetical protein; Psort location: Cytoplasmic, score: 9.67. | DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. | 0.949 |