STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB48881.1ABC transporter, substrate-binding protein; KEGG: sah:SaurJH1_2478 1.2e-10 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 8.78; Belongs to the bacterial solute-binding protein 9 family. (429 aa)    
Predicted Functional Partners:
KXB48880.1
KEGG: fma:FMG_0226 1.0e-57 zinc ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.982
KXB48879.1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 1.1e-26 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.978
KXB53876.1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 5.9e-21 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.937
KXB53877.1
KEGG: fma:FMG_0024 6.4e-31 putative zinc ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.800
KXB48882.1
Hypothetical protein; KEGG: sah:SaurJH1_2478 1.8e-08 ribulose-phosphate 3-epimerase K01783.
  
 
  0.692
KXB51783.1
Repeat protein; Psort location: Cellwall, score: 9.39.
  
     0.487
KXB48214.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: mab:MAB_0309 1.6e-09 DNA polymerase III subunit gamma/tau; K02343 DNA polymerase III subunit gamma/tau.
  
     0.465
KXB52355.1
KEGG: ere:EUBREC_3553 2.2e-46 serine-type D-Ala-D-Ala carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
     0.425
KXB54204.1
Hypothetical protein; KEGG: spd:SPD_0558 0. prtA; cell wall-associated serine protease PrtA; K01362; Psort location: Cellwall, score: 9.39.
  
     0.424
KXB54055.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: scl:sce0516 0.00025 two-component sensor histidine kinase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.421
Your Current Organism:
Coriobacteriales bacterium DNF00809
NCBI taxonomy Id: 1588753
Other names: C. bacterium DNF00809
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