STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB48043.1CRISPR system CASCADE complex protein CasB. (191 aa)    
Predicted Functional Partners:
KXB48042.1
CRISPR system CASCADE complex protein CasC; Psort location: Cytoplasmic, score: 7.50.
 
 0.999
KXB48044.1
Putative CRISPR system CASCADE complex protein CasA; KEGG: kol:Kole_0061 0.00086 Type III site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.997
KXB48040.1
CRISPR system CASCADE complex protein CasE.
 
 
 0.992
KXB48045.1
CRISPR-associated helicase Cas3; KEGG: pog:Pogu_0649 0.00024 Lhr-like helicase K03724; Psort location: CytoplasmicMembrane, score: 8.16.
 
  
 0.959
KXB48041.1
CRISPR system CASCADE complex protein CasD.
 
     0.952
cas1
CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
  
 0.911
KXB48038.1
CRISPR-associated endoribonuclease Cas2; KEGG: dca:Desca_1500 1.3e-15 DNA polymerase III subunit alpha K03763; Psort location: Cytoplasmic, score: 9.97.
 
     0.738
KXB49636.1
Hypothetical protein; KEGG: sud:ST398NM01_2402 1.7e-09 Esterase; Psort location: Cytoplasmic, score: 7.50.
  
     0.496
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.437
Your Current Organism:
Coriobacteriales bacterium DNF00809
NCBI taxonomy Id: 1588753
Other names: C. bacterium DNF00809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.