STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB47839.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
KXB47838.1
DEAD/DEAH box helicase; KEGG: eyy:EGYY_07040 4.2e-107 hypothetical protein; K11927 ATP-dependent RNA helicase RhlE; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family.
       0.594
fhs
KEGG: ccu:Ccur_02250 5.1e-196 Formate-tetrahydrofolate ligase K01938; Psort location: Cytoplasmic, score: 7.50; Belongs to the formate--tetrahydrofolate ligase family.
       0.580
KXB47841.1
KEGG: ova:OBV_16310 2.7e-41 fchA; methenyltetrahydrofolate cyclohydrolase; Psort location: Cytoplasmic, score: 9.97.
       0.446
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.446
Your Current Organism:
Coriobacteriales bacterium DNF00809
NCBI taxonomy Id: 1588753
Other names: C. bacterium DNF00809
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