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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB94042.1Hypothetical protein; KEGG: say:TPY_3350 3.9e-05 ruvX; Holliday junction resolvase; K07447 putative holliday junction resolvase. (86 aa)    
Predicted Functional Partners:
KXB94043.1
RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.811
KXB94044.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.799
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.797
KXB94040.1
Putative phage head-tail adaptor; KEGG: bqy:MUS_1036 5.7e-25 yhaN; myosin-heavy-chain kinase; Psort location: Cytoplasmic, score: 7.50.
       0.493
KXB94041.1
Exonuclease SbcCD, D subunit; KEGG: bsr:I33_1120 1.0e-48 YhaO; Psort location: Cytoplasmic, score: 7.50.
       0.493
KXB94046.1
Hypothetical protein.
       0.402
Your Current Organism:
Veillonellaceae bacterium DNF00626
NCBI taxonomy Id: 1588754
Other names: V. bacterium DNF00626
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