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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB93474.1Ribonuclease, Rne/Rng family; KEGG: med:MELS_1542 4.9e-81 S1 RNA binding domain protein; K08301 ribonuclease G; Psort location: Cytoplasmic, score: 9.67. (471 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.955
KXB89879.1
Hypothetical protein; Displays ATPase and GTPase activities.
 
 
 
 0.824
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 
 0.802
KXB92566.1
KEGG: sri:SELR_06660 9.9e-90 cshA; putative DEAD-box ATP-dependent RNA helicase CshA; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.792
KXB91803.1
KEGG: vpr:Vpar_1378 5.0e-166 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.792
KXB93472.1
Radical SAM domain protein; KEGG: ctc:CTC02064 4.9e-175 Fe-S oxidoreductase K03423; Psort location: Cytoplasmic, score: 7.50.
 
     0.786
KXB93470.1
KEGG: lml:lmo4a_1600 4.9e-33 minD; septum site-determining protein K03609; Psort location: CytoplasmicMembrane, score: 8.78.
   
   0.780
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
    0.778
KXB93273.1
r3H domain protein; KEGG: sgg:SGGBAA2069_c20720 4.3e-18 jag; Jag family RNA-binding protein K06346; Psort location: Cytoplasmic, score: 7.50.
   
   0.769
KXB93469.1
Penicillin-binding protein 2; KEGG: sri:SELR_24010 2.1e-135 pbpA; putative peptidoglycan glycosyltransferase K05515; Psort location: CytoplasmicMembrane, score: 9.51.
  
    0.760
Your Current Organism:
Veillonellaceae bacterium DNF00626
NCBI taxonomy Id: 1588754
Other names: V. bacterium DNF00626
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