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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB93293.1DNA-binding helix-turn-helix protein; KEGG: mox:DAMO_2330 0.00016 N-6 DNA methylase; K03427 type I restriction enzyme M protein. (79 aa)    
Predicted Functional Partners:
KXB93291.1
Toxin-antitoxin system, toxin component, Fic family; KEGG: pdn:HMPREF9137_0457 8.6e-20 purC_2; phosphoribosylaminoimidazole succinocarboxamide synthase; Psort location: Cytoplasmic, score: 7.50.
 
     0.802
KXB93292.1
KEGG: rho:RHOM_01100 1.0e-247 type I restriction-modification system subunit M; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 7.50.
       0.794
KXB93290.1
KEGG: tsu:Tresu_0516 8.4e-109 restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 7.50.
       0.782
KXB93289.1
KEGG: zmp:Zymop_2045 3.5e-55 putative type I restriction-modification system specificity protein; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 7.50.
       0.694
KXB93288.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.662
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.511
KXB93294.1
Transporter, DASS family; KEGG: pfe:PSF113_3633 7.3e-08 arsenic efflux pump protein K03893; Psort location: CytoplasmicMembrane, score: 10.00.
       0.403
Your Current Organism:
Veillonellaceae bacterium DNF00626
NCBI taxonomy Id: 1588754
Other names: V. bacterium DNF00626
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