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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (422 aa)    
Predicted Functional Partners:
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; KEGG: sri:SELR_23790 1.9e-157 hemL; putative glutamate-1-semialdehyde 2,1-aminomutase K01845; Psort location: Cytoplasmic, score: 9.97.
 
 0.997
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
  
 0.993
KXB92572.1
KEGG: ssg:Selsp_0361 6.0e-131 Porphobilinogen synthase K01698; Psort location: Cytoplasmic, score: 7.50; Belongs to the ALAD family.
 
  
 0.956
KXB92576.1
KEGG: med:MELS_1867 1.3e-34 siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; Psort location: Cytoplasmic, score: 7.50.
    
 0.921
KXB92573.1
KEGG: sri:SELR_23810 4.1e-148 hemD; uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase K13542.
 
  
 0.918
KXB92577.1
Putative copper-sensing transcriptional repressor CsoR; Psort location: Cytoplasmic, score: 7.50.
   
   0.808
KXB93612.1
tRNA ligase class I, catalytic domain protein; KEGG: med:MELS_1159 1.6e-66 glutamyl-tRNA synthetase family protein; K01885 glutamyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.788
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.783
KXB92579.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.773
KXB89545.1
KEGG: clj:CLJU_c09340 0. pyruvate:ferredoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
   
   0.609
Your Current Organism:
Veillonellaceae bacterium DNF00626
NCBI taxonomy Id: 1588754
Other names: V. bacterium DNF00626
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