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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB89844.1DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. (659 aa)    
Predicted Functional Partners:
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
 
    0.933
KXB89843.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.803
tmcAL
Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
  
     0.693
KXB91162.1
Methyltransferase small domain protein; KEGG: cls:CXIVA_11480 1.1e-40 hypothetical protein; K15460 tRNA1Val (adenine37-N6)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.490
KXB89846.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.475
KXB89842.1
HIRAN domain protein; KEGG: aar:Acear_0716 1.8e-05 single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 7.50.
 
     0.470
KXB89841.1
DnaJ domain protein; KEGG: edi:EDI_341030 5.2e-07 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
 
     0.467
KXB89062.1
Hydrolase, HD family; KEGG: ova:OBV_29760 1.9e-31 nadD; nicotinate-nucleotide adenylyltransferase K00969; Psort location: Cytoplasmic, score: 7.50.
  
     0.449
KXB94044.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.445
KXB93627.1
KEGG: cbb:CLD_1610 7.7e-35 hypothetical protein; K06967 tRNA (adenine22-N1)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.432
Your Current Organism:
Veillonellaceae bacterium DNF00626
NCBI taxonomy Id: 1588754
Other names: V. bacterium DNF00626
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