STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT83706.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
SDT92317.1
Replicative DNA helicase.
  
 
 0.818
SDU53492.1
Error-prone DNA polymerase.
   
 0.802
dnaE2
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
   
 0.802
SDU40729.1
DNA polymerase-3 subunit alpha.
   
 0.802
priA
Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
    
 
 0.795
SDU68144.1
DNA polymerase-3 subunit delta'.
    
 
 0.782
SDU69839.1
DNA polymerase-3 subunit gamma/tau.
    
 
 0.782
SDT83705.1
DNA N-6-adenine-methyltransferase (Dam).
  
    0.778
SDT83707.1
Hypothetical protein.
       0.775
SDT83704.1
Hypothetical protein.
       0.773
Your Current Organism:
Gordonia westfalica
NCBI taxonomy Id: 158898
Other names: CCUG 46924, DSM 44215, G. westfalica, Gordonia westfalica Linos et al. 2002, JCM 11757, NRRL B-24152, strain Kb2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.