STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU42839.1acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit. (483 aa)    
Predicted Functional Partners:
SDU42793.1
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.994
SDU51261.1
methylmalonyl-CoA epimerase.
 
 
 0.989
SDU52399.1
Biotin carboxyl carrier protein /biotin carboxylase.
 
 0.989
SDU42826.1
Beta-ketoacyl ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.988
SDU50710.1
Fatty acid synthase.
  
 
 0.980
SDU60572.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
 
 0.971
SDU57506.1
Carbamoyl-phosphate synthase L chain, N-terminal domain.
 
 0.970
SDU57494.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
 
 0.966
SDU72289.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.944
SDU74098.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.943
Your Current Organism:
Gordonia westfalica
NCBI taxonomy Id: 158898
Other names: CCUG 46924, DSM 44215, G. westfalica, Gordonia westfalica Linos et al. 2002, JCM 11757, NRRL B-24152, strain Kb2
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