STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU72682.1MoxR-like ATPase. (345 aa)    
Predicted Functional Partners:
SDU72677.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.974
SDU72687.1
Protein of unknown function.
 
     0.932
SDU72692.1
Protein of unknown function.
 
     0.924
SDU31954.1
Protein of unknown function DUF58.
  
 0.781
SDU72667.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.687
SDU37603.1
Magnesium chelatase subunit D.
  
 
 0.687
SDU72662.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.648
SDU72697.1
Steroid delta-isomerase.
       0.573
SDU31932.1
Ca-activated chloride channel family protein.
 
 
 0.569
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.498
Your Current Organism:
Gordonia westfalica
NCBI taxonomy Id: 158898
Other names: CCUG 46924, DSM 44215, G. westfalica, Gordonia westfalica Linos et al. 2002, JCM 11757, NRRL B-24152, strain Kb2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.