STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU73447.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (168 aa)    
Predicted Functional Partners:
SDU73452.1
FMN reductase.
 
  
 0.962
SDU38491.1
cob(II)yrinic acid a,c-diamide reductase.
  
 
 0.847
SDU80396.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 
 0.846
SDU80598.1
FMN reductase.
 
  
 0.825
SDU55831.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
  
  0.823
SDU73268.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
  
  0.823
SDU45094.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
  
  0.822
SDU32916.1
Riboflavin synthase alpha chain.
  
 
 0.819
SDU73110.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
  
  0.816
SDU36488.1
Hypothetical protein.
  
 0.811
Your Current Organism:
Gordonia westfalica
NCBI taxonomy Id: 158898
Other names: CCUG 46924, DSM 44215, G. westfalica, Gordonia westfalica Linos et al. 2002, JCM 11757, NRRL B-24152, strain Kb2
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