STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU22090.1Polysaccharide pyruvyl transferase family protein WcaK. (436 aa)    
Predicted Functional Partners:
SDU21816.1
Metallo-beta-lactamase superfamily protein.
  
     0.696
SDU50801.1
OpgC protein.
  
     0.664
SDU22115.1
2-polyprenyl-6-methoxyphenol hydroxylase.
       0.639
SDU78735.1
Butirosin biosynthesis protein H, N-terminal.
  
     0.572
SDU72623.1
SdpI/YhfL protein family protein.
  
     0.567
SDU22308.1
Hypothetical protein.
       0.535
SDU22332.1
Polyphosphate kinase 2, PA0141 family.
       0.535
SDU22045.1
PPOX class probable F420-dependent enzyme.
       0.505
SDU69754.1
AAA domain-containing protein.
 
    0.502
SDU58025.1
Surface polysaccharide O-acyltransferase, integral membrane enzyme.
 
     0.499
Your Current Organism:
Gordonia westfalica
NCBI taxonomy Id: 158898
Other names: CCUG 46924, DSM 44215, G. westfalica, Gordonia westfalica Linos et al. 2002, JCM 11757, NRRL B-24152, strain Kb2
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