STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU34922.1Polyketide cyclase / dehydrase and lipid transport. (142 aa)    
Predicted Functional Partners:
SDU52692.1
CO or xanthine dehydrogenase, Mo-binding subunit.
  
 
 0.751
SDU38139.1
Protein of unknown function.
  
     0.699
SDU61833.1
Hypothetical protein.
  
     0.682
SDU44236.1
Lysophospholipase L1.
  
     0.671
SDU53764.1
Hypothetical protein.
  
     0.628
SDU58493.1
Uncharacterized conserved protein, DUF2236 family.
  
     0.610
SDU34902.1
Ribonuclease D.
       0.604
SDU36031.1
Hypothetical protein.
  
     0.587
SDU54280.1
Protein of unknown function.
  
     0.581
SDU81020.1
Hypothetical protein.
 
     0.567
Your Current Organism:
Gordonia westfalica
NCBI taxonomy Id: 158898
Other names: CCUG 46924, DSM 44215, G. westfalica, Gordonia westfalica Linos et al. 2002, JCM 11757, NRRL B-24152, strain Kb2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.