STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU79032.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (329 aa)    
Predicted Functional Partners:
SDU79037.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 
 0.972
SDU79042.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 
 0.971
SDU79016.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.970
SDU79022.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 
 0.959
SDU79011.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
  0.955
SDU79047.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
     0.948
SDU60296.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
  0.927
SDU66736.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
  0.927
SDU69273.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
  0.927
SDU79397.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
  0.927
Your Current Organism:
Gordonia westfalica
NCBI taxonomy Id: 158898
Other names: CCUG 46924, DSM 44215, G. westfalica, Gordonia westfalica Linos et al. 2002, JCM 11757, NRRL B-24152, strain Kb2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.