STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU83674.1Acyl-coenzyme A thioesterase PaaI, contains HGG motif. (158 aa)    
Predicted Functional Partners:
SDU80691.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.680
SDU55271.1
Ferredoxin-NADP reductase.
 
 
  0.635
SDU55259.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.598
SDU55294.1
Hypothetical protein.
  
     0.587
SDU48245.1
acyl-CoA dehydrogenase.
  
    0.573
SDU53512.1
Thioester reductase domain-containing protein.
 
     0.573
SDU55282.1
Fatty acid desaturase.
  
     0.571
SDU78511.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
  
     0.568
SDU72651.1
Acyl-CoA dehydrogenase.
  
    0.564
SDU39980.1
2,4-dienoyl-CoA reductase (NADPH2).
 
   
 0.559
Your Current Organism:
Gordonia westfalica
NCBI taxonomy Id: 158898
Other names: CCUG 46924, DSM 44215, G. westfalica, Gordonia westfalica Linos et al. 2002, JCM 11757, NRRL B-24152, strain Kb2
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