STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEY00_Acc21565Nuclear cap-binding protein like. (864 aa)    
Predicted Functional Partners:
CEY00_Acc22413
Nuclear cap-binding protein subunit 2.
   
 0.998
CEY00_Acc10010
Nuclear cap-binding protein subunit 2.
   
 0.998
CEY00_Acc26188
Serrate RNA effector molecule like.
  
 0.996
CEY00_Acc21425
Small nuclear ribonucleoprotein-associated protein.
   
 0.996
CEY00_Acc15128
Serrate RNA effector molecule like.
  
 0.996
CEY00_Acc28362
THO complex subunit like.
  
 
 0.993
CEY00_Acc17601
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.993
CEY00_Acc12876
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.993
CEY00_Acc06855
mRNA cap guanine-N7 methyltransferase.
   
 
 0.992
CEY00_Acc28272
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
     
 0.990
Your Current Organism:
Actinidia chinensis
NCBI taxonomy Id: 1590841
Other names: A. chinensis var. chinensis, Actinidia chinensis var. chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.