CEY00_Acc18681 protein (Actinidia chinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CEY00_Acc18681

Autophagy-related protein. (54 aa)

Predicted Functional Partners:

CEY00_Acc22333

0.993

CEY00_Acc24240

0.987

CEY00_Acc05337

0.987

CEY00_Acc21397

0.977

CEY00_Acc06560

0.977

CEY00_Acc29375

0.962

CEY00_Acc19713

0.962

CEY00_Acc19899

0.953

CEY00_Acc15796

0.953

CEY00_Acc29686

0.936

Your Current Organism:

Actinidia chinensis

NCBI taxonomy Id: 1590841
Other names: A. chinensis var. chinensis, Actinidia chinensis var. chinensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEY00_Acc05337	CEY00_Acc06560	A0A2R6RJ90	A0A2R6RGB2	Autophagy protein 5; Required for autophagy.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.946
CEY00_Acc05337	CEY00_Acc15796	A0A2R6RJ90	A0A2R6QNM1	Autophagy protein 5; Required for autophagy.	Autophagy-related protein.	0.784
CEY00_Acc05337	CEY00_Acc18681	A0A2R6RJ90	A0A2R6QI99	Autophagy protein 5; Required for autophagy.	Autophagy-related protein.	0.987
CEY00_Acc05337	CEY00_Acc19713	A0A2R6RJ90	A0A2R6QDQ2	Autophagy protein 5; Required for autophagy.	Autophagy-related protein.	0.784
CEY00_Acc05337	CEY00_Acc19899	A0A2R6RJ90	A0A2R6Q832	Autophagy protein 5; Required for autophagy.	Autophagy-related protein.	0.784
CEY00_Acc05337	CEY00_Acc21397	A0A2R6RJ90	A0A2R6Q6X7	Autophagy protein 5; Required for autophagy.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.946
CEY00_Acc05337	CEY00_Acc22333	A0A2R6RJ90	A0A2R6PT21	Autophagy protein 5; Required for autophagy.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.997
CEY00_Acc05337	CEY00_Acc29375	A0A2R6RJ90	A0A2R6PCX3	Autophagy protein 5; Required for autophagy.	Autophagy-related protein.	0.784
CEY00_Acc05337	CEY00_Acc29686	A0A2R6RJ90	A0A2R6PDN1	Autophagy protein 5; Required for autophagy.	Autophagy-related protein.	0.988
CEY00_Acc06560	CEY00_Acc05337	A0A2R6RGB2	A0A2R6RJ90	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Autophagy protein 5; Required for autophagy.	0.946
CEY00_Acc06560	CEY00_Acc15796	A0A2R6RGB2	A0A2R6QNM1	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Autophagy-related protein.	0.973
CEY00_Acc06560	CEY00_Acc18681	A0A2R6RGB2	A0A2R6QI99	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Autophagy-related protein.	0.977
CEY00_Acc06560	CEY00_Acc19713	A0A2R6RGB2	A0A2R6QDQ2	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Autophagy-related protein.	0.979
CEY00_Acc06560	CEY00_Acc19899	A0A2R6RGB2	A0A2R6Q832	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Autophagy-related protein.	0.973
CEY00_Acc06560	CEY00_Acc22333	A0A2R6RGB2	A0A2R6PT21	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.996
CEY00_Acc06560	CEY00_Acc24240	A0A2R6RGB2	A0A2R6Q1K0	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Autophagy protein 5; Required for autophagy.	0.946
CEY00_Acc06560	CEY00_Acc29375	A0A2R6RGB2	A0A2R6PCX3	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Autophagy-related protein.	0.979
CEY00_Acc06560	CEY00_Acc29686	A0A2R6RGB2	A0A2R6PDN1	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Autophagy-related protein.	0.820
CEY00_Acc15796	CEY00_Acc05337	A0A2R6QNM1	A0A2R6RJ90	Autophagy-related protein.	Autophagy protein 5; Required for autophagy.	0.784
CEY00_Acc15796	CEY00_Acc06560	A0A2R6QNM1	A0A2R6RGB2	Autophagy-related protein.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.973