STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEY00_Acc14293Squamosa promoter-binding-like protein. (471 aa)    
Predicted Functional Partners:
CEY00_Acc14413
DNA polymerase delta small subunit like.
    
 0.833
CEY00_Acc17039
Crossover junction endonuclease.
    
 0.728
CEY00_Acc08079
Serine/threonine-protein kinase; Belongs to the protein kinase superfamily.
   
 0.697
CEY00_Acc08028
DNA polymerase.
   
 0.677
CEY00_Acc17601
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.656
CEY00_Acc12876
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.656
CEY00_Acc08124
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit like.
   
   0.656
CEY00_Acc21846
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A like.
    
   0.636
CEY00_Acc16161
DNA replication ATP-dependent helicase.
    
 0.634
CEY00_Acc28106
Peptidyl-prolyl cis-trans isomerase-like.
    
 0.613
Your Current Organism:
Actinidia chinensis
NCBI taxonomy Id: 1590841
Other names: A. chinensis var. chinensis, Actinidia chinensis var. chinensis
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