STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEY00_Acc08477Cell division control protein 48 D like; Belongs to the AAA ATPase family. (297 aa)    
Predicted Functional Partners:
CEY00_Acc31651
NPL4-like protein.
   
 0.970
CEY00_Acc19599
NPL4-like protein.
   
 0.970
CEY00_Acc26050
Plant UBX domain-containing protein.
   
 0.969
CEY00_Acc17485
Plant UBX domain-containing protein.
   
 0.959
CEY00_Acc09722
Plant UBX domain-containing protein.
   
 0.959
CEY00_Acc21628
Ubiquitin thioesterase.
   
 0.956
CEY00_Acc32844
Plant UBX domain-containing protein.
    
 0.955
CEY00_Acc24922
Plant UBX domain-containing protein.
   
 0.948
CEY00_Acc02129
Plant UBX domain-containing protein.
   
 0.948
CEY00_Acc24977
UBX domain-containing protein.
    
 0.930
Your Current Organism:
Actinidia chinensis
NCBI taxonomy Id: 1590841
Other names: A. chinensis var. chinensis, Actinidia chinensis var. chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.