STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBGlutathione synthase; Belongs to the prokaryotic GSH synthase family. (339 aa)    
Predicted Functional Partners:
Daro_0011
Glutamate--cysteine ligase GshA.
 
  
 0.986
Daro_2961
Peptidase M17, leucyl aminopeptidase, C-terminal; Belongs to the peptidase M17 family.
   
 
 0.927
pepA
Aminopeptidase A, Metallo peptidase, MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.927
Daro_3289
Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal.
 
  
 0.924
Daro_2114
Enzymatic protein of unknown function; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.920
Daro_0488
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.919
Daro_1090
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.919
Daro_1720
Peptidase M20C, Xaa-His dipeptidase.
     
 0.917
Daro_3676
Alanyl aminopeptidase, Metallo peptidase, MEROPS family M01.
    
 0.913
Daro_1382
Glutathione S-transferase, N-terminal.
    
 0.905
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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