STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daro_0035Major facilitator superfamily MFS_1. (405 aa)    
Predicted Functional Partners:
Daro_0036
MOSC protein.
       0.773
Daro_0037
N-acetylglucosamine kinase.
     
 0.738
Daro_0038
Hypothetical protein.
       0.727
Daro_0039
Conserved hypothetical protein.
       0.520
Daro_1056
Extracellular solute-binding protein, family 1.
  
  
 0.431
Daro_1200
Extracellular solute-binding protein, family 1.
  
  
 0.431
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.428
Daro_0237
Glycerophosphoryl diester phosphodiesterase.
  
  
 0.418
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.