Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Daro_0435 | Daro_0436 | Phenylacetic acid degradation-related protein. | Hypothetical protein. | 0.697 |
Daro_0435 | Daro_0437 | Phenylacetic acid degradation-related protein. | Protein phosphatase 2C-like protein. | 0.669 |
Daro_0435 | Daro_0438 | Phenylacetic acid degradation-related protein. | Protein kinase. | 0.487 |
Daro_0435 | Daro_0439 | Phenylacetic acid degradation-related protein. | Hypothetical protein. | 0.484 |
Daro_0436 | Daro_0435 | Hypothetical protein. | Phenylacetic acid degradation-related protein. | 0.697 |
Daro_0436 | Daro_0437 | Hypothetical protein. | Protein phosphatase 2C-like protein. | 0.881 |
Daro_0436 | Daro_0438 | Hypothetical protein. | Protein kinase. | 0.816 |
Daro_0436 | Daro_0439 | Hypothetical protein. | Hypothetical protein. | 0.539 |
Daro_0436 | Daro_0440 | Hypothetical protein. | Dihydrolipoamide dehydrogenase. | 0.415 |
Daro_0436 | Daro_0925 | Hypothetical protein. | Cyclic nucleotide-binding:Protein kinase. | 0.731 |
Daro_0436 | Daro_1602 | Hypothetical protein. | Protein kinase:GAF. | 0.736 |
Daro_0436 | Daro_2941 | Hypothetical protein. | Hypothetical protein. | 0.723 |
Daro_0436 | Daro_3849 | Hypothetical protein. | Serine/threonine protein kinase. | 0.718 |
Daro_0437 | Daro_0435 | Protein phosphatase 2C-like protein. | Phenylacetic acid degradation-related protein. | 0.669 |
Daro_0437 | Daro_0436 | Protein phosphatase 2C-like protein. | Hypothetical protein. | 0.881 |
Daro_0437 | Daro_0438 | Protein phosphatase 2C-like protein. | Protein kinase. | 0.937 |
Daro_0437 | Daro_0439 | Protein phosphatase 2C-like protein. | Hypothetical protein. | 0.560 |
Daro_0437 | Daro_0440 | Protein phosphatase 2C-like protein. | Dihydrolipoamide dehydrogenase. | 0.908 |
Daro_0437 | Daro_0925 | Protein phosphatase 2C-like protein. | Cyclic nucleotide-binding:Protein kinase. | 0.855 |
Daro_0437 | Daro_1602 | Protein phosphatase 2C-like protein. | Protein kinase:GAF. | 0.833 |
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