STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daro_0555Response regulator receiver. (266 aa)    
Predicted Functional Partners:
Daro_3006
PAS protein.
 
 
 0.960
Daro_0240
Hpt sensor hybrid histidine kinase.
 
 
0.938
Daro_0008
PAS protein.
 
 
0.936
Daro_0223
PAS protein.
 
 
0.936
Daro_0244
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.933
Daro_0738
Two-component system, chemotaxis family, sensor kinase CheA; CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt.
 
 
 0.933
Daro_0551
PAS protein.
 
 
0.930
Daro_2934
PAS protein.
 
 
 0.929
Daro_0737
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
 
  0.928
Daro_2890
Peptidase M52, hydrogen uptake protein.
 
 
0.928
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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