STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daro_1046Hypothetical protein. (129 aa)    
Predicted Functional Partners:
Daro_3091
Conserved hypothetical transmembrane protein.
 
     0.659
Daro_3128
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
 
     0.649
Daro_3126
YeeE/YedE.
  
     0.635
Daro_1929
Rhodanese-like protein.
 
     0.624
Daro_3092
Sulfur compound chelating protein SoxZ.
 
     0.590
Daro_3132
Thiosulfate-binding protein SoxY.
 
     0.578
Daro_0607
Conserved hypothetical protein.
  
     0.505
Daro_3131
Sulfur compound chelating protein SoxZ.
 
     0.491
Daro_1045
Conserved hypothetical protein.
       0.473
Daro_4041
YeeE/YedE.
  
     0.473
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.