Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Daro_1253 | Daro_1254 | Hypothetical protein. | Glycosyl transferase, group 1. | 0.774 |
Daro_1253 | Daro_1255 | Hypothetical protein. | NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. | 0.780 |
Daro_1253 | Daro_1256 | Hypothetical protein. | Nucleotidyl transferase. | 0.657 |
Daro_1253 | Daro_1258 | Hypothetical protein. | dTDP-4-dehydrorhamnose epimerase. | 0.711 |
Daro_1253 | Daro_1259 | Hypothetical protein. | NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. | 0.653 |
Daro_1253 | Daro_1260 | Hypothetical protein. | Glycosyl transferase, family 2. | 0.660 |
Daro_1253 | Daro_1261 | Hypothetical protein. | Glycosyl transferase, group 1. | 0.643 |
Daro_1253 | Daro_1264 | Hypothetical protein. | UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase; NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase. | 0.651 |
Daro_1253 | Daro_1265 | Hypothetical protein. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.637 |
Daro_1254 | Daro_1253 | Glycosyl transferase, group 1. | Hypothetical protein. | 0.774 |
Daro_1254 | Daro_1255 | Glycosyl transferase, group 1. | NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. | 0.925 |
Daro_1254 | Daro_1256 | Glycosyl transferase, group 1. | Nucleotidyl transferase. | 0.736 |
Daro_1254 | Daro_1258 | Glycosyl transferase, group 1. | dTDP-4-dehydrorhamnose epimerase. | 0.775 |
Daro_1254 | Daro_1259 | Glycosyl transferase, group 1. | NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. | 0.753 |
Daro_1254 | Daro_1260 | Glycosyl transferase, group 1. | Glycosyl transferase, family 2. | 0.749 |
Daro_1254 | Daro_1261 | Glycosyl transferase, group 1. | Glycosyl transferase, group 1. | 0.852 |
Daro_1254 | Daro_1264 | Glycosyl transferase, group 1. | UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase; NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase. | 0.698 |
Daro_1254 | Daro_1265 | Glycosyl transferase, group 1. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.731 |
Daro_1254 | Daro_2416 | Glycosyl transferase, group 1. | Glycosyl transferase, group 1. | 0.684 |
Daro_1255 | Daro_1253 | NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. | Hypothetical protein. | 0.780 |
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