Daro_2012 protein (Dechloromonas aromatica) - STRING interaction network

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Score

Daro_2012

Protein of unknown function DUF177. (187 aa)

Predicted Functional Partners:

rpmF

0.982

rpsP

0.903

rpsC

0.900

rpsF

0.899

rplK

0.895

rpsB

0.890

rplM

0.889

Daro_2676

0.889

trmD

0.888

rplU

0.888

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Daro_2012	Daro_2676	Daro_2012	Daro_2676	Protein of unknown function DUF177.	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.889
Daro_2012	rplK	Daro_2012	Daro_0308	Protein of unknown function DUF177.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.895
Daro_2012	rplM	Daro_2012	Daro_0649	Protein of unknown function DUF177.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.889
Daro_2012	rplU	Daro_2012	Daro_3470	Protein of unknown function DUF177.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.888
Daro_2012	rpmF	Daro_2012	Daro_2013	Protein of unknown function DUF177.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.982
Daro_2012	rpsB	Daro_2012	Daro_1742	Protein of unknown function DUF177.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.890
Daro_2012	rpsC	Daro_2012	Daro_0325	Protein of unknown function DUF177.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.900
Daro_2012	rpsF	Daro_2012	Daro_1216	Protein of unknown function DUF177.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.899
Daro_2012	rpsP	Daro_2012	Daro_3066	Protein of unknown function DUF177.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.903
Daro_2012	trmD	Daro_2012	Daro_3064	Protein of unknown function DUF177.	tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.888
Daro_2676	Daro_2012	Daro_2676	Daro_2012	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Protein of unknown function DUF177.	0.889
Daro_2676	rplK	Daro_2676	Daro_0308	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.931
Daro_2676	rplM	Daro_2676	Daro_0649	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.960
Daro_2676	rplU	Daro_2676	Daro_3470	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.947
Daro_2676	rpmF	Daro_2676	Daro_2013	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.918
Daro_2676	rpsB	Daro_2676	Daro_1742	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.989
Daro_2676	rpsC	Daro_2676	Daro_0325	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.988
Daro_2676	rpsF	Daro_2676	Daro_1216	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.987
Daro_2676	rpsP	Daro_2676	Daro_3066	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.951
Daro_2676	trmD	Daro_2676	Daro_3064	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.531