STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daro_2213Hypothetical protein. (372 aa)    
Predicted Functional Partners:
Daro_2212
Hypothetical protein.
 
     0.952
Daro_2210
Hypothetical protein.
 
     0.855
Daro_2209
Hypothetical protein.
 
     0.840
Daro_2211
KAP P-loop.
 
     0.834
Daro_2208
TatD-related deoxyribonuclease.
 
     0.663
Daro_2336
Phage integrase; Belongs to the 'phage' integrase family.
  
     0.535
Daro_2207
TIR protein.
       0.482
Daro_2214
Hypothetical protein.
       0.456
Daro_2206
Hypothetical protein.
       0.437
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.