STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daro_3263Conserved hypothetical protein. (156 aa)    
Predicted Functional Partners:
Daro_3262
ABC transporter, transmembrane region:ABC transporter related protein.
 
     0.949
Daro_3264
Cyanophycin synthetase.
 
     0.895
Daro_3265
Cyanophycin synthetase.
 
     0.893
Daro_3202
ABC transporter, transmembrane region:ABC transporter related protein.
   
 
 0.842
Daro_0178
Acyltransferase 3.
  
     0.727
Daro_0348
ABC transporter, transmembrane region:ABC transporter related protein.
    
 0.661
Daro_2088
Conserved hypothetical protein.
  
     0.645
Daro_1022
Cytochrome c-552 precursor.
  
     0.586
Daro_3602
AAA ATPase, central region.
   
 0.565
Daro_3261
Radical SAM.
       0.543
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.