Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Daro_0237 | Daro_3345 | Daro_0237 | Daro_3345 | Glycerophosphoryl diester phosphodiesterase. | Major facilitator superfamily MFS_1. | 0.418 |
Daro_0237 | glpK | Daro_0237 | Daro_1922 | Glycerophosphoryl diester phosphodiesterase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.888 |
Daro_1056 | Daro_1200 | Daro_1056 | Daro_1200 | Extracellular solute-binding protein, family 1. | Extracellular solute-binding protein, family 1. | 0.901 |
Daro_1056 | Daro_3345 | Daro_1056 | Daro_3345 | Extracellular solute-binding protein, family 1. | Major facilitator superfamily MFS_1. | 0.431 |
Daro_1200 | Daro_1056 | Daro_1200 | Daro_1056 | Extracellular solute-binding protein, family 1. | Extracellular solute-binding protein, family 1. | 0.901 |
Daro_1200 | Daro_3345 | Daro_1200 | Daro_3345 | Extracellular solute-binding protein, family 1. | Major facilitator superfamily MFS_1. | 0.431 |
Daro_3342 | Daro_3343 | Daro_3342 | Daro_3343 | Conserved hypothetical protein. | Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.956 |
Daro_3342 | Daro_3344 | Daro_3342 | Daro_3344 | Conserved hypothetical protein. | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.928 |
Daro_3342 | Daro_3345 | Daro_3342 | Daro_3345 | Conserved hypothetical protein. | Major facilitator superfamily MFS_1. | 0.578 |
Daro_3342 | Daro_3346 | Daro_3342 | Daro_3346 | Conserved hypothetical protein. | Cytochrome c, class I. | 0.435 |
Daro_3342 | Daro_3348 | Daro_3342 | Daro_3348 | Conserved hypothetical protein. | Hypothetical protein. | 0.446 |
Daro_3343 | Daro_3342 | Daro_3343 | Daro_3342 | Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Conserved hypothetical protein. | 0.956 |
Daro_3343 | Daro_3344 | Daro_3343 | Daro_3344 | Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.970 |
Daro_3343 | Daro_3345 | Daro_3343 | Daro_3345 | Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Major facilitator superfamily MFS_1. | 0.578 |
Daro_3343 | Daro_3346 | Daro_3343 | Daro_3346 | Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Cytochrome c, class I. | 0.423 |
Daro_3344 | Daro_3342 | Daro_3344 | Daro_3342 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Conserved hypothetical protein. | 0.928 |
Daro_3344 | Daro_3343 | Daro_3344 | Daro_3343 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.970 |
Daro_3344 | Daro_3345 | Daro_3344 | Daro_3345 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Major facilitator superfamily MFS_1. | 0.662 |
Daro_3344 | Daro_3346 | Daro_3344 | Daro_3346 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Cytochrome c, class I. | 0.423 |
Daro_3345 | Daro_0237 | Daro_3345 | Daro_0237 | Major facilitator superfamily MFS_1. | Glycerophosphoryl diester phosphodiesterase. | 0.418 |
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