Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Daro_0041 | Daro_0733 | Hypothetical protein. | Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. | 0.428 |
Daro_0041 | Daro_0889 | Hypothetical protein. | Hypothetical protein. | 0.470 |
Daro_0041 | Daro_3746 | Hypothetical protein. | Hypothetical protein. | 0.481 |
Daro_0484 | Daro_0733 | Metal-dependent phosphohydrolase, HD subdomain. | Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. | 0.462 |
Daro_0484 | Daro_0889 | Metal-dependent phosphohydrolase, HD subdomain. | Hypothetical protein. | 0.420 |
Daro_0484 | Daro_0970 | Metal-dependent phosphohydrolase, HD subdomain. | Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain. | 0.468 |
Daro_0484 | Daro_0971 | Metal-dependent phosphohydrolase, HD subdomain. | PAS protein. | 0.430 |
Daro_0484 | Daro_3746 | Metal-dependent phosphohydrolase, HD subdomain. | Hypothetical protein. | 0.577 |
Daro_0622 | Daro_0733 | Putative signal transduction protein. | Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. | 0.522 |
Daro_0622 | Daro_0965 | Putative signal transduction protein. | PAS:Hemerythrin HHE cation binding region. | 0.408 |
Daro_0622 | Daro_0970 | Putative signal transduction protein. | Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain. | 0.522 |
Daro_0622 | Daro_0971 | Putative signal transduction protein. | PAS protein. | 0.478 |
Daro_0622 | Daro_3746 | Putative signal transduction protein. | Hypothetical protein. | 0.534 |
Daro_0733 | Daro_0041 | Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. | Hypothetical protein. | 0.428 |
Daro_0733 | Daro_0484 | Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. | Metal-dependent phosphohydrolase, HD subdomain. | 0.462 |
Daro_0733 | Daro_0622 | Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. | Putative signal transduction protein. | 0.522 |
Daro_0733 | Daro_0970 | Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. | Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain. | 0.419 |
Daro_0733 | Daro_1683 | Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. | HDIG protein. | 0.436 |
Daro_0733 | Daro_3746 | Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. | Hypothetical protein. | 0.471 |
Daro_0889 | Daro_0041 | Hypothetical protein. | Hypothetical protein. | 0.470 |
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