STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daro_3818Toluene 4-monooxygenase protein C. (111 aa)    
Predicted Functional Partners:
Daro_3816
Toluene 4-monooxygenase protein E.
 
 
  0.988
Daro_3820
Toluene 4-monooxygenase protein A.
 
 
  0.988
Daro_3819
Toluene 4-monooxygenase protein B.
   
  0.976
Daro_3817
Toluene 4-monooxygenase protein D.
    
  0.966
Daro_3815
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region.
 
  
 0.958
Daro_2912
Sulfite reductase (NADPH) beta subunit.
  
  
 0.917
Daro_2914
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite.
    
 0.909
Daro_1458
Thiosulfate sulfurtransferase.
   
 
  0.901
Daro_3055
Rhodanese-like protein.
    
  0.901
Daro_3794
Phenol 2-monooxygenase P3 subunit.
   
  0.848
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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