STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPF_00603-oxoacyl-(acyl-carrier-protein) reductase. (254 aa)    
Predicted Functional Partners:
DPF_1340
Hypothetical protein.
  
 0.997
DPF_0334
Pyruvate-ferredoxin oxidoreductase.
   
 0.956
DPF_1824
Pyridine nucleotide-disulfide oxidoreductase.
    
 0.929
DPF_1336
Type I polyketide synthase.
  
 0.923
DPF_1851
acetyl-CoA carboxylase.
  
 
 0.903
DPF_1337
Anatoxin-a synthetase G polyketide synthase.
  
 0.855
DPF_0591
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 0.851
DPF_0396
Malonyl CoA-ACP transacylase.
 0.841
DPF_0177
Hypothetical protein.
   
 
 0.798
DPF_1064
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.789
Your Current Organism:
Desulfoplanes formicivorans
NCBI taxonomy Id: 1592317
Other names: D. formicivorans, DSM 28890, Desulfomicrobiaceae bacterium Pf12B, Desulfoplanes formicivorans Watanabe et al. 2015, NBRC 110391, strain Pf12B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.