STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPF_0162PhoU family transcriptional regulator; Plays a role in the regulation of phosphate uptake. (229 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
 0.984
DPF_0158
Phosphate ABC transporter permease.
 
  
 0.968
DPF_2604
Phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.957
DPF_2605
Phosphate ABC transporter permease.
 
  
 0.956
DPF_0156
Phosphate ABC transporter substrate-binding protein.
 
  
 0.908
DPF_0637
Signal peptidase I; Belongs to the peptidase S26 family.
  
    0.888
DPF_0157
Phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.866
DPF_2607
Phosphate-binding protein.
 
  
 0.857
DPF_2606
Phosphate ABC transporter permease.
 
  
 0.818
DPF_0108
Phosphate transport regulator.
    
 0.796
Your Current Organism:
Desulfoplanes formicivorans
NCBI taxonomy Id: 1592317
Other names: D. formicivorans, DSM 28890, Desulfomicrobiaceae bacterium Pf12B, Desulfoplanes formicivorans Watanabe et al. 2015, NBRC 110391, strain Pf12B
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