STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPF_0507Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (563 aa)    
Predicted Functional Partners:
DPF_0067
(S)-2-hydroxy-acid oxidase.
  
 0.937
DPF_0505
(Fe-S)-binding protein.
 
  
 0.918
DPF_0509
(Fe-S)-binding protein.
 
  
 0.806
DPF_0784
Oxidoreductase.
  
  
 0.774
DPF_0508
FAD-binding protein.
 
  
 0.766
DPF_0908
Hypothetical protein.
  
  
 0.685
DPF_0504
Lactate utilization protein B/C.
 
  
 0.680
DPF_0334
Pyruvate-ferredoxin oxidoreductase.
  
  
 0.628
DPF_0448
1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
   
  
 0.627
DPF_0461
Heterodisulfide reductase subunit C-like protein.
  
  
 0.542
Your Current Organism:
Desulfoplanes formicivorans
NCBI taxonomy Id: 1592317
Other names: D. formicivorans, DSM 28890, Desulfomicrobiaceae bacterium Pf12B, Desulfoplanes formicivorans Watanabe et al. 2015, NBRC 110391, strain Pf12B
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